Metadata

Name CCU000 COVID-19
Type Disease or Syndrome
Group Disease or Syndrome
Data Sources




Clinical Terminologies SNOMED-CT
ICD-10
Codelists covid_impact_ccu000_England_COVID19_ICD10.csv covid_impact_ccu000_England_COVID19_SNOMEDCT.csv
Valid Event Data Range 31/01/2020 - 31/10/2020
Sex Female
Male
Authors Angela Wood, Rachel Denholm, Sam Hollings, Jennifer Cooper, Samantha Ip,Venexia Walker, Spiros Denaxas, Ashley Akbari, Amitava Banerjee, William Whiteley, Alvina Lai, Jonathan Sterne, Cathie Sudlow, CVD-COVID-UK consortium
Agreement Date 29 Mar 2020
Version (UUID) Revision 1 (COVID-IMPACT)

Phenotypes

England hospitalization EHR: COVID-19 diagnosis

icd10code icd10term type
U071 COVID-19, virus identified 1
U072 COVID-19, virus not identified 1

England primary care EHR: COVID-19 diagnosis

conceptId term flag type
1321181000000108 Coronavirus disease 19 caused by severe acute respiratory syndrome coronavirus 2 record extraction simple reference set (foundation metadata concept) Clinically confirmed 1
1321201000000107 Coronavirus disease 19 caused by severe acute respiratory syndrome coronavirus 2 health issues simple reference set (foundation metadata concept) Clinically confirmed 1
1321191000000105 Coronavirus disease 19 caused by severe acute respiratory syndrome coronavirus 2 procedures simple reference set (foundation metadata concept) Clinically confirmed 1
1321331000000107 Arbitrary concentration of severe acute respiratory syndrome coronavirus 2 total immunoglobulin in serum (observable entity) Lab confirmed historic 0
1321301000000101 Severe acute respiratory syndrome coronavirus 2 ribonucleic acid qualitative existence in specimen (observable entity) Lab confirmed incidence 1
1321811000000105 Severe acute respiratory syndrome coronavirus 2 immunoglobulin A qualitative existence in specimen (observable entity) Lab confirmed historic 0
1321311000000104 Severe acute respiratory syndrome coronavirus 2 immunoglobulin M qualitative existence in specimen (observable entity) Lab confirmed historic 0
1321321000000105 Severe acute respiratory syndrome coronavirus 2 immunoglobulin G qualitative existence in specimen (observable entity) Lab confirmed historic 0
1322871000000109 Severe acute respiratory syndrome coronavirus 2 antibody detection result positive (finding) Lab confirmed historic 0
1240751000000100 Coronavirus disease 19 caused by severe acute respiratory syndrome coronavirus 2 (disorder) Clinically confirmed 1
1321551000000106 Severe acute respiratory syndrome coronavirus 2 immunoglobulin M detected (finding) Lab confirmed historic 0
1321241000000105 Cardiomyopathy caused by severe acute respiratory syndrome coronavirus 2 (disorder) Clinically confirmed 1
1240411000000107 Ribonucleic acid of severe acute respiratory syndrome coronavirus 2 (substance) Lab confirmed incidence 1
1240421000000101 Serotype severe acute respiratory syndrome coronavirus 2 (qualifier value) Lab confirmed historic 0
1240391000000107 Antigen of severe acute respiratory syndrome coronavirus 2 (substance) Lab confirmed incidence 1
1008541000000105 Coronavirus ribonucleic acid detection assay (observable entity) Lab confirmed incidence 1
1029481000000103 Coronavirus nucleic acid detection assay (observable entity) Lab confirmed incidence 1
1300631000000101 Coronavirus disease 19 severity score (observable entity) Clinically confirmed 1
1300671000000104 Coronavirus disease 19 severity scale (assessment scale) Clinically confirmed 1
121973000 Measurement of coronavirus antibody (procedure) Lab confirmed historic 0
120814005 Coronavirus antibody (substance) Lab confirmed historic 0
186747009 Coronavirus infection (disorder) Clinically confirmed 1
1321211000000109 Coronavirus disease 19 caused by severe acute respiratory syndrome coronavirus 2 presenting complaints simple reference set (foundation metadata concept) Clinically confirmed 1
1300731000000106 Coronavirus disease 19 caused by severe acute respiratory syndrome coronavirus 2 confirmed using clinical diagnostic criteria (situation) Clinically confirmed 1
1321351000000100 Arbitrary concentration of severe acute respiratory syndrome coronavirus 2 immunoglobulin M in serum (observable entity) Lab confirmed historic 0
1321801000000108 Arbitrary concentration of severe acute respiratory syndrome coronavirus 2 immunoglobulin A in serum (observable entity) Lab confirmed historic 0
1321341000000103 Arbitrary concentration of severe acute respiratory syndrome coronavirus 2 immunoglobulin G in serum (observable entity) Lab confirmed historic 0
1300721000000109 Coronavirus disease 19 caused by severe acute respiratory syndrome coronavirus 2 confirmed by laboratory test (situation) Lab confirmed unclear 1
1240511000000106 Detection of severe acute respiratory syndrome coronavirus 2 using polymerase chain reaction technique (procedure) Lab confirmed incidence 1
1240541000000107 Infection of upper respiratory tract caused by severe acute respiratory syndrome coronavirus 2 (disorder) Clinically confirmed 1
1322781000000102 Severe acute respiratory syndrome coronavirus 2 antigen detection result positive (finding) Lab confirmed incidence 1
1240581000000104 Severe acute respiratory syndrome coronavirus 2 ribonucleic acid detected (finding) Lab confirmed incidence 1
1321761000000103 Severe acute respiratory syndrome coronavirus 2 immunoglobulin A detected (finding) Lab confirmed historic 0
1321541000000108 Severe acute respiratory syndrome coronavirus 2 immunoglobulin G detected (finding) Lab confirmed historic 0
1240571000000101 Gastroenteritis caused by severe acute respiratory syndrome coronavirus 2 (disorder) Clinically confirmed 1
1240561000000108 Encephalopathy caused by severe acute respiratory syndrome coronavirus 2 (disorder) Clinically confirmed 1
1240521000000100 Otitis media caused by severe acute respiratory syndrome coronavirus 2 (disorder) Clinically confirmed 1
1240531000000103 Myocarditis caused by severe acute respiratory syndrome coronavirus 2 (disorder) Clinically confirmed 1
1240551000000105 Pneumonia caused by severe acute respiratory syndrome coronavirus 2 (disorder) Clinically confirmed 1
1240741000000103 Severe acute respiratory syndrome coronavirus 2 serology (observable entity) Lab confirmed historic 0
1240401000000105 Antibody to severe acute respiratory syndrome coronavirus 2 (substance) Lab confirmed historic 0
1300681000000102 Assessment using coronavirus disease 19 severity scale (procedure) Clinically confirmed 1
1240381000000105 Severe acute respiratory syndrome coronavirus 2 (organism) Clinically confirmed 1

Publication

Angela Wood, Rachel Denholm, Sam Hollings, Jennifer Cooper, Samantha Ip,Venexia Walker, Spiros Denaxas, Ashley Akbari, Amitava Banerjee, William Whiteley, Alvina Lai, Jonathan Sterne, Cathie Sudlow, CVD-COVID-UK consortium. Linked electronic health records for research on a nationwide cohort of more than 54 million people in England data resource BMJ 2021; 373 :n826 doi:10.1136/bmj.n826

https://www.bmj.com/content/373/bmj.n826